AMTR_s00019p00201260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.235

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000210 (SeedPlants) Phylogenetic Tree(s): OG_03_0000210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00201260
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.02 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.02 Archaeplastida
AT2G02820 MYB88, AtMYB88 myb domain protein 88 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.04 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_36145 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g45020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_322432g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_355131g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_93111g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Smo78303 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo93784 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g065840.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e022280_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030293_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 LandPlants
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 LandPlants
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 LandPlants
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 LandPlants
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.02 LandPlants
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 LandPlants
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 LandPlants
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 LandPlants
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 LandPlants
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.03 LandPlants
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 LandPlants
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 LandPlants
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 LandPlants
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 LandPlants
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 LandPlants
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.04 LandPlants
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01035462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Gb_15814 No alias transcription factor (MYB) 0.02 LandPlants
Gb_29520 No alias transcription factor (MYB) 0.02 LandPlants
Gb_36145 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.05 LandPlants
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os04g45020.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.06 LandPlants
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.05 LandPlants
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.06 LandPlants
MA_10426901g0020 No alias transcription factor (MYB) 0.02 LandPlants
MA_121533g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_128244g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_16413g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_2797g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_322432g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_355131g0010 No alias transcription factor (MYB) 0.05 LandPlants
MA_460508g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_62361g0010 No alias transcription factor (MYB) 0.03 LandPlants
MA_8206949g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_83918g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_9476g0040 No alias Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 LandPlants
Mp3g23170.1 No alias transcription factor (MYB) 0.02 LandPlants
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 LandPlants
Smo78303 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Smo90153 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Smo93784 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.04 LandPlants
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc09g090130.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc11g065840.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e002919_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e015145_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e017428_P003 No alias transcription factor (MYB) 0.06 LandPlants
Zm00001e019501_P001 No alias transcription factor (MYB) 0.06 LandPlants
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e027531_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e030293_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e034118_P001 No alias transcription factor (MYB) 0.04 LandPlants
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e035619_P002 No alias transcription factor (MYB) 0.04 LandPlants
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 LandPlants
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 SeedPlants
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 SeedPlants
Zm00001e022280_P001 No alias transcription factor (MYB) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 111
IPR001005 SANT/Myb 14 62
No external refs found!