Lfl_g00743 (PBF1)

Aliases : PBF1

Description : beta-type-6 component *(PBF) of 26S proteasome & original description: none

Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g00743

Target	Alias	Description	ECC score	Gene Family Method
AT3G60820	PBF1	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.05	OrthoFinder output from all 47 species
Aev_g01998	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Aob_g00526	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Aop_g00288	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Cre26.g756797	PBF1	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
LOC_Os09g32800.1	PBF1, LOC_Os09g32800	component beta type-6 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Sam_g09893	No alias	beta-type-6 component *(PBF) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Solyc02g084920.3.1	PBF1, Solyc02g084920	component beta type-6 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Spa_g13091	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Zm00001e010121_P001	PBF1, Zm00001e010121	component beta type-6 of 26S proteasome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	9	204

External Links

No external refs found!