- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RNA editing factor *(POCO) & original description: none
Gene families : OG0000613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000613_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00264580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g030656 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055159 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g28661 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30824 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11741 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g32967 | PPR596 | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02151 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11231 | No alias | RNA editing factor *(POCO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01745 | PPR596 | RNA editing factor *(POCO) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g14866 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03895 | No alias | RNA editing factor *(POCO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01020534001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024964001 | No alias | Pentatricopeptide repeat-containing protein At1g07590,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g17320.1 | PPR596, LOC_Os01g17320 | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19490.1 | LOC_Os01g19490 | Pentatricopeptide repeat-containing protein At4g01990,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g55310.1 | LOC_Os02g55310 | Pentatricopeptide repeat-containing protein At5g27460... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g40750.1 | LOC_Os07g40750 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g35750.1 | LOC_Os10g35750 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g35760.2 | LOC_Os10g35760 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19004 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10791 | PPR596 | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_29755g0010 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
| MA_492314g0010 | No alias | RNA editing factor (POCO) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25474 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06280 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28147 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51005 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g071900.3.1 | Solyc06g071900 | Pentatricopeptide repeat-containing protein At1g07590,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g054090.3.1 | Solyc07g054090 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g37476 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e025470_P001 | PPR596, Zm00001e025470 | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026211_P002 | Zm00001e026211 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| No external refs found! |