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  5. Lfl_g00731

Lfl_g00731 (ATVAMP725, VAMP725)


Aliases : ATVAMP725, VAMP725

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000188 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00731

Target Alias Description ECC score Gene Family Method Actions
Adi_g034842 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 39 species
Azfi_s0064.g035436 ATVAMP721,... non-SNARE-type phytolongin & original description: CDS=304-1083 0.01 OrthoFinder output from all 39 species
Cba_g08568 VAMP727, ATVAMP727 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Cba_g69182 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 39 species
GSVIVT01000524001 VAMP726, ATVAMP726 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 39 species
GSVIVT01028579001 ATVAMP721,... Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 39 species
Ore_g05657 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 39 species
Pir_g56924 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 34 101
IPR042855 V_SNARE_CC 129 215
No external refs found!