1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g07254

Ala_g07254


Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07254
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Als_g11304 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Als_g22500 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g52651 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024618 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Sam_g13393 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Sam_g37018 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Spa_g07827 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Spa_g09265 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Tin_g20974 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 479 542
IPR001606 ARID_dom 247 331
No external refs found!