Aliases : RR2, ARR2
Description : subgroup ARR-B transcription factor & original description: none
Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g07229 | |
Cluster | HCCA: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g054623 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g080126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g06717 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g06024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011650001 | ARR1, RR1 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.03 | OrthoFinder output from all 47 species | |
Len_g24821 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_9051g0010 | ARR1, RR1 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g21220.1 | LUX, PCL1 | component LUX of circadian clock Evening complex (EC) | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05785 | RR14, ARR14 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g12654 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo90720 | ARR11 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.07 | OrthoFinder output from all 47 species | |
Solyc12g010330.2.1 | RR18, ARR18,... | B-type cytokinin ARR response activator. transcription... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
CC | GO:0016459 | myosin complex | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001789 | Sig_transdc_resp-reg_receiver | 52 | 161 |
No external refs found! |