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  5. Ala_g07158

Ala_g07158


Description : histone demethylase *(PKDM8) & original description: none


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07158

Target Alias Description ECC score Gene Family Method Actions
Cre17.g709550 PKDM7D RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
Dac_g33188 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12715 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015513_P005 Zm00001e015513 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 241 364
IPR003349 JmjN 65 98
IPR004198 Znf_C5HC2 456 500
No external refs found!