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  5. Ala_g07050

Ala_g07050


Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0002359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07050
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00170140 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder output from all 47 species
Adi_g022176 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07178 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0467.g072840 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=239-1459 0.03 OrthoFinder output from all 47 species
Mp1g28900.1 No alias AP-endonuclease (APE2) 0.02 OrthoFinder output from all 47 species
Msp_g37389 No alias AP-endonuclease *(APE2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11932 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 4 257
No external refs found!