Ala_g06882


Description : not classified & original description: none


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06882

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G77800 No alias PHD finger family protein 0.06 OrthoFinder output from all 47 species
Als_g14225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009840 No alias not classified & original description: CDS=194-4429 0.04 OrthoFinder output from all 47 species
Cba_g15576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G080500.1 Ceric.29G080500 not classified & original description: pacid=50624681... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.90 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_12353 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os02g52960.1 LOC_Os02g52960 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10690.1 LOC_Os06g10690 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Lfl_g19258 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10435451g0030 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g14549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022590 No alias not classified & original description: CDS=632-4768 0.07 OrthoFinder output from all 47 species
Sam_g14038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo407186 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Tin_g13964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!