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  5. Lfl_g00669

Lfl_g00669 (PBC1)


Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00669
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Aev_g00417 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011490 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cba_g26177 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000826.22 PBC1 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder output from all 47 species
Cre06.g267500 PBC1 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Dcu_g35364 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01008836001 PBC1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
LOC_Os06g43570.1 PBC1, LOC_Os06g43570 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Len_g24778 PBC2 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c7_520V3.1 PBC1, Pp3c7_520 proteasome beta subunit C1 0.02 OrthoFinder output from all 47 species
Ppi_g06188 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e013846_P001 PBC1, Zm00001e013846 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e030465_P001 PBC1, Zm00001e030465 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 188
No external refs found!