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  5. Ala_g06570

Ala_g06570


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06570
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Als_g04983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01681 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_30381 RHC1A Probable E3 ubiquitin-protein ligase RHC2A... 0.04 OrthoFinder output from all 47 species
Lfl_g40832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Solyc03g121690.1.1 Solyc03g121690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g05316 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e038199_P001 RHC1A, Zm00001e038199 Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 273 315
IPR039525 RNF126-like_zinc-ribbon 10 39
No external refs found!