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  5. Ala_g06166

Ala_g06166 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06166

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0075.g037599 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dde_g07395 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036686001 HUA1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Lfl_g29415 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_8911g0010 HUA1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g06907 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ppi_g12544 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g13535 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 162 187
IPR000571 Znf_CCCH 381 406
IPR000571 Znf_CCCH 337 361
IPR000571 Znf_CCCH 249 272
IPR000571 Znf_CCCH 109 133
No external refs found!