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  5. Ala_g05168

Ala_g05168


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05168
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00080p00099010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035473 No alias not classified & original description: CDS=1-4050 0.03 OrthoFinder output from all 47 species
Cba_g07712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.06 OrthoFinder output from all 47 species
Ceric.24G040200.1 Ceric.24G040200 not classified & original description: pacid=50630010... 0.03 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.04 OrthoFinder output from all 47 species
Dac_g22737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11632 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g19810.1 LOC_Os11g19810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02506 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001848 No alias not classified & original description: CDS=1-3909 0.04 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 1057 1140
No external refs found!