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  5. Ala_g04893

Ala_g04893


Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04893
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g016371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09212.t1 Aspi01Gene09212 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014050001 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
Len_g20786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 OrthoFinder output from all 47 species
Mp1g07710.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 324 351
IPR002885 Pentatricopeptide_repeat 101 126
IPR002885 Pentatricopeptide_repeat 435 459
IPR002885 Pentatricopeptide_repeat 71 93
IPR002885 Pentatricopeptide_repeat 469 494
IPR002885 Pentatricopeptide_repeat 503 533
IPR002885 Pentatricopeptide_repeat 561 618
IPR033443 PPR_long 136 266
IPR002885 Pentatricopeptide_repeat 639 686
No external refs found!