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  5. Lfl_g00472

Lfl_g00472


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00472
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Adi_g009203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g17465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g22069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g23553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006081 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.03 OrthoFinder output from all 47 species
Solyc01g086970.4.1 Solyc01g086970 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037603_P001 Zm00001e037603 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 113 150
IPR002653 Znf_A20 24 46
No external refs found!