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  5. Ala_g04527

Ala_g04527


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04527
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.04 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14487.t1 Aspi01Gene14487 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25549.t1 Aspi01Gene25549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27928.t1 Aspi01Gene27928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0096.g043731 No alias not classified & original description: CDS=1-1527 0.05 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g20948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
LOC_Os05g09280.1 LOC_Os05g09280 Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 255 411
No external refs found!