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  5. Ala_g04435

Ala_g04435 (SCRM2, ICE2)


Aliases : SCRM2, ICE2

Description : transcription factor *(ICE1/2) & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04435
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.05 OrthoFinder output from all 47 species
AMTR_s00184p00048850 bHLH093,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G12860 SCRM2, ICE2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65640 bHLH093 beta HLH protein 93 0.02 OrthoFinder output from all 47 species
Ala_g15617 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14438 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00507.t2 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03868.t1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03868.t2 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66445.t1 ATICE1, ICE1,... transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.08 OrthoFinder output from all 47 species
Azfi_s0560.g076949 SCRM2, ICE2 transcription factor *(ICE1/2) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G023800.1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.23G086600.1 SCRM2, ICE2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g15833 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17361 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004405001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01008637001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.04 OrthoFinder output from all 47 species
GSVIVT01032998001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
Gb_30129 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os06g50900.1 bHLH093, LOC_Os06g50900 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os11g32100.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
Len_g04800 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.07 OrthoFinder output from all 47 species
MA_10435231g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
MA_12807g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.08 OrthoFinder output from all 47 species
Ppi_g55587 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002409 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-732 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026391 SCRM2, ICE2 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Sam_g12143 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo91237 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
Smo94010 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
Solyc02g091690.3.1 bHLH093, Solyc02g091690 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc03g118310.4.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.01 OrthoFinder output from all 47 species
Solyc12g088130.3.1 bHLH093, Solyc12g088130 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g04208 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06696 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g08227 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013304_P003 bHLH093, Zm00001e013304 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 447 489
No external refs found!