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  5. Ala_g04273

Ala_g04273


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04273

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G041300.1 Ceric.24G041300 translation elongation factor *(EF-P) & original... 0.05 OrthoFinder output from all 47 species
Cre16.g690800 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g691000 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g11332 No alias translation elongation factor *(EF-P) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01030181001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g02380.1 LOC_Os12g02380 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species
Mp4g02120.1 No alias EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Pnu_g08895 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Solyc10g075020.3.1 Solyc10g075020 EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Spa_g11669 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR001059 Transl_elong_P/YeiP_cen 113 163
IPR015365 Elong-fact-P_C 171 226
IPR013185 Transl_elong_KOW-like 45 102
No external refs found!