1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g04222

Ala_g04222 (EMB3012)


Aliases : EMB3012

Description : nucleoporin of nuclear pore complex *(GP210) & original description: none


Gene families : OG0005031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04222
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00191680 EMB3012,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT5G40480 EMB3012 embryo defective 3012 0.03 OrthoFinder output from all 47 species
Adi_g025539 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39338.t1 EMB3012, Aspi01Gene39338 nucleoporin of nuclear pore complex *(GP210) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene39340.t1 EMB3012, Aspi01Gene39340 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19243 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01032403001 EMB3012 Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from all 47 species
Len_g30750 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g05759 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g09499 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019101 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Smo99561 EMB3012 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Solyc02g070810.4.1 EMB3012, Solyc02g070810 GP210 nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Tin_g21306 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e009488_P002 EMB3012, Zm00001e009488 GP210 nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!