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  5. Ala_g04057

Ala_g04057


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04057

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22457 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Gb_07025 No alias transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.02 OrthoFinder output from all 47 species
MA_430451g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Solyc06g007530.2.1 Solyc06g007530 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12989 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Zm00001e021364_P001 Zm00001e021364 B3 domain-containing protein Os11g0197600 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 129 217
No external refs found!