1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g03588

Ala_g03588 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g03588
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Adi_g117153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05627 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.04 OrthoFinder output from all 47 species
Cba_g13501 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G004500.1 Ceric.02G004500 not classified & original description: pacid=50584632... 0.03 OrthoFinder output from all 47 species
Ceric.15G002000.1 Ceric.15G002000 not classified & original description: pacid=50640344... 0.03 OrthoFinder output from all 47 species
Ceric.17G084700.1 Ceric.17G084700 not classified & original description: pacid=50618199... 0.03 OrthoFinder output from all 47 species
Dcu_g13635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009384 No alias not classified & original description: CDS=123-3881 0.04 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 1086 1165
IPR002885 Pentatricopeptide_repeat 478 519
IPR002885 Pentatricopeptide_repeat 275 322
IPR002885 Pentatricopeptide_repeat 778 825
IPR002885 Pentatricopeptide_repeat 685 711
IPR002885 Pentatricopeptide_repeat 379 408
IPR002885 Pentatricopeptide_repeat 917 944
IPR002885 Pentatricopeptide_repeat 582 626
No external refs found!