Ala_g03009


Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g03009

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G09590 No alias Translation protein SH3-like family protein 0.05 OrthoFinder output from all 47 species
AT1G09690 No alias Translation protein SH3-like family protein 0.05 OrthoFinder output from all 47 species
Adi_g043900 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g043901 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g05077 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g09546 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.07G094100.1 Ceric.07G094100 component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.10G032200.1 Ceric.10G032200 component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000640.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g04750.1 LOC_Os03g04750 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os10g32820.1 LOC_Os10g32820 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Nbi_g17034 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c12_9320V3.1 Pp3c12_9320 Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Pp3c13_2360V3.1 Pp3c13_2360 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c3_5550V3.1 Pp3c3_5550 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Sam_g38886 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo170832 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc10g078960.2.1 Solyc10g078960 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc10g080590.2.1 Solyc10g080590 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g21282 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g21283 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e000341_P001 Zm00001e000341 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e012727_P001 Zm00001e012727 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e038963_P001 Zm00001e038963 component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!