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  5. Ala_g02639

Ala_g02639 (UPL5)


Aliases : UPL5

Description : E3 ubiquitin ligase *(UPL5) & original description: none


Gene families : OG0002826 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002826_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02639
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cre01.g022100 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g00961 UPL5 E3 ubiquitin ligase *(UPL5) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os09g31090.2 UPL5, LOC_Os09g31090 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
MA_100348g0010 UPL5 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Pir_g09809 UPL5 E3 ubiquitin ligase *(UPL5) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000477 UPL5 E3 ubiquitin ligase *(UPL5) & original description: CDS=570-3545 0.03 OrthoFinder output from all 47 species
Sam_g25345 No alias E3 ubiquitin ligase *(UPL5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36181 No alias E3 ubiquitin ligase *(UPL5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38805 No alias E3 ubiquitin ligase *(UPL5) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 805 1114
IPR000626 Ubiquitin-like_dom 282 353
No external refs found!