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  5. Ala_g02493

Ala_g02493


Description : not classified & original description: none


Gene families : OG0005452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02493

Target Alias Description ECC score Gene Family Method Actions
Adi_g021115 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.20G028100.1 Ceric.20G028100 not classified & original description: pacid=50566612... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19530.1 LOC_Os03g19530 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g35470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_50249g0010 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e038325_P002 Zm00001e038325 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 252 423
IPR001650 Helicase_C 472 568
No external refs found!