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  5. Ala_g02477

Ala_g02477 (ATPUB17, PUB17)


Aliases : ATPUB17, PUB17

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02477

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00142930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g50065 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28347.t1 PUB14, ATPUB14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03347 PUB14, ATPUB14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04978 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10832 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09283 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10888 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20244 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01319 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29462 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33917 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06298 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 283 354
IPR000225 Armadillo 414 452
IPR000225 Armadillo 582 622
No external refs found!