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  5. Ala_g02465

Ala_g02465


Description : not classified & original description: none


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02465

Target Alias Description ECC score Gene Family Method Actions
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
Aev_g07285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46085.t1 Aspi01Gene46085 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G060200.1 Ceric.09G060200 not classified & original description: pacid=50588484... 0.04 OrthoFinder output from all 47 species
Dde_g38041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g56280.1 LOC_Os02g56280 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42980.1 LOC_Os04g42980 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g01350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo99409 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g14357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015127_P001 Zm00001e015127 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 315 504
IPR001841 Znf_RING 112 141
IPR032838 Vwaint_dom 676 746
No external refs found!