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  5. Ala_g02176

Ala_g02176 (STOP1)


Aliases : STOP1

Description : C2H2-type subclass STOP transcription factor & original description: none


Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02176
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Adi_g021450 STOP1 C2H2-type subclass STOP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g08098 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18644 STOP1 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g36360.1 STOP1, LOC_Os02g36360 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g09490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020288 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!