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Aliases : WTF1, AtWTF1
Description : plastidial RNA basal splicing factor *(WTF1) & original description: none
Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g02152 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0055.g033936 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027077001 | WTF1, AtWTF1 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| MA_158434g0010 | WTF1, AtWTF1 | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08880 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10439 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004928 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g35883 | No alias | plastidial RNA basal splicing factor *(WTF1) & original... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0042586 | peptide deformylase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021099 | PORR_domain | 67 | 391 |
| No external refs found! |