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  5. Ala_g01784

Ala_g01784 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : component *(MSI1) of PRC2 histone methylation complex & original description: none


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01784

Target Alias Description ECC score Gene Family Method Actions
AT4G35050 NFC3, MSI3 Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
Als_g06181 MSI1, MEE70, ATMSI1 flowering time factor *(FVE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G012200.1 MSI1, MEE70,... component *(MSI1) of PRC2 histone methylation complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43890.1 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 OrthoFinder output from all 47 species
MA_70799g0010 MSI1, MEE70, ATMSI1 component CAF1c/MSI of CAF1 histone chaperone complex 0.02 OrthoFinder output from all 47 species
Nbi_g00848 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.03 OrthoFinder output from all 47 species
Solyc01g104510.3.1 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 221 257
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 267 300
IPR022052 Histone-bd_RBBP4_N 21 90
No external refs found!