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  5. Ala_g01359

Ala_g01359 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01359

Target Alias Description ECC score Gene Family Method Actions
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.05 OrthoFinder output from all 47 species
Als_g39830 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aop_g11465 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Aspi01Gene48941.t1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009713 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035436 ATVAMP721,... non-SNARE-type phytolongin & original description: CDS=304-1083 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046179 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Cba_g69182 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ceric.27G008700.1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cre04.g224750 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Cre04.g225850 VAMP727, ATVAMP727 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Dcu_g02420 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58840.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 OrthoFinder output from all 47 species
MA_94963g0010 ATVAMP725, VAMP725 R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Mp7g07410.1 ATVAMP721,... VAMP7-type R-type SNARE longin protein 0.05 OrthoFinder output from all 47 species
Msp_g07629 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Ore_g42106 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Pir_g13299 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001719 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Sam_g38843 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Spa_g38131 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e003924_P002 VAMP727,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Zm00001e033056_P001 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 30 97
IPR042855 V_SNARE_CC 140 226
No external refs found!