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  5. Ala_g01143

Ala_g01143


Description : small subunit of methylthioalkylmalate isomerase & original description: none


Gene families : OG0004189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01143
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G43090 No alias Aconitase/3-isopropylmalate dehydratase protein 0.02 OrthoFinder output from all 47 species
Adi_g018696 No alias small subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species
Msp_g00985 No alias small subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species
Sam_g06110 No alias small subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species
Spa_g12965 No alias small subunit of methylthioalkylmalate isomerase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 140 195
No external refs found!