Ala_g00887


Description : not classified & original description: none


Gene families : OG0002355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002355_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g00887

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00104540 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g026365 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g026366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13447 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.38G002700.1 Ceric.38G002700 not classified & original description: pacid=50580344... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.74 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g50971 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g03295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026980001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g10495.1 LOC_Os07g10495 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22250 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g16375 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_2209381g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_26499g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g14720.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06712 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002163 No alias not classified & original description: CDS=116-802 0.06 OrthoFinder output from all 47 species
Solyc01g095000.3.1 Solyc01g095000 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g22231 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g10818 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e007173_P001 Zm00001e007173 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 107 214
No external refs found!