Cre09.g402450

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT3 regulatory component

Gene families : OG_01_0002892 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002892_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre09.g402450
Cluster	HCCA: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00161980	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.regulatory...	0.02	Archaeplastida
AT5G58290	RPT3	regulatory particle triple-A ATPase 3	0.05	Archaeplastida
Cpa\|evm.model.tig00022075.46	No alias	26S proteasome regulatory subunit 6B homolog...	0.08	Archaeplastida
LOC_Os02g21970.1	No alias	regulatory component RPT3 of 26S proteasome	0.13	Archaeplastida
MA_13350g0010	No alias	26S proteasome regulatory subunit 6B homolog...	0.03	Archaeplastida
Mp8g10830.1	No alias	regulatory component RPT3 of 26S proteasome	0.09	Archaeplastida
Smo163630	No alias	Protein degradation.26S proteasome.regulatory...	0.02	Archaeplastida
Smo180600	No alias	Protein degradation.26S proteasome.regulatory...	0.04	Archaeplastida
Solyc06g082630.4.1	No alias	regulatory component RPT3 of 26S proteasome	0.05	Archaeplastida
Solyc06g082660.4.1	No alias	regulatory component RPT3 of 26S proteasome	0.03	Archaeplastida
Zm00001e014107_P001	No alias	regulatory component RPT3 of 26S proteasome	0.06	Archaeplastida
Zm00001e022619_P001	No alias	regulatory component RPT3 of 26S proteasome	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	198	330
IPR032501	Prot_ATP_ID_OB	85	140

External Links

No external refs found!