Msp_g48811


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48811
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g004490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005739 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013826 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g038036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087501 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09260 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37414 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037197 No alias not classified & original description: CDS=1-1461 0.04 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G109500.1 Ceric.04G109500 not classified & original description: pacid=50632099... 0.03 OrthoFinder output from all 47 species
Ceric.06G034400.1 Ceric.06G034400 not classified & original description: pacid=50619664... 0.03 OrthoFinder output from all 47 species
Ceric.39G004000.1 EMB2758, Ceric.39G004000 not classified & original description: pacid=50582620... 0.04 OrthoFinder output from all 47 species
Dac_g04615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07790 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18761 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23801 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36371 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40077 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g46025 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22647 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
Len_g03913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01950 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16047 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30264 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33277 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 175 199
IPR002885 Pentatricopeptide_repeat 503 550
IPR002885 Pentatricopeptide_repeat 200 247
IPR002885 Pentatricopeptide_repeat 103 148
IPR002885 Pentatricopeptide_repeat 403 450
IPR002885 Pentatricopeptide_repeat 301 348
No external refs found!