Msp_g48755 (SDE3)

Aliases : SDE3

Description : not classified & original description: none

Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g48755

Target	Alias	Description	ECC score	Gene Family Method	Actions
Adi_g009523	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g015269	SDE3	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	329	350
IPR000571	Znf_CCCH	169	188
IPR046439	ZF_RZ_dom	2078	2131
IPR000270	PB1_dom	47	141
IPR041367	Znf-CCCH_4	273	292
IPR041367	Znf-CCCH_4	223	242
IPR041677	DNA2/NAM7_AAA_11	786	1270
IPR041679	DNA2/NAM7-like_C	1281	1483

External Links

No external refs found!