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  5. Msp_g48707

Msp_g48707 (AFH14)


Aliases : AFH14

Description : group-II formin actin filament elongation factor & original description: none


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48707

Target Alias Description ECC score Gene Family Method Actions
AT1G31810 AFH14 Formin Homology 14 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033781 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g24278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43328 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g43894 No alias group-II formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Dcu_g44394 AFH14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06809 AHF1, FH1, AFH1, ATFH1 group-II formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g31997 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003875001 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01007958001 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
MA_134166g0010 AFH14 Formin-like protein 14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_4962g0010 No alias Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Ore_g36823 AFH14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64389 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Sam_g52608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo74599 AFH14 Cytoskeleton.microfilament network.actin... 0.05 OrthoFinder output from all 47 species
Solyc08g075670.2.1 AFH14, Solyc08g075670 Formin-like protein 14 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g10008 AFH14 group-II formin acTin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e004057_P003 AFH14, Zm00001e004057 group-II formin actin filament elongation factor 0.04 OrthoFinder output from all 47 species
Zm00001e016114_P001 Zm00001e016114 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 473 847
No external refs found!