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  5. Msp_g48306

Msp_g48306


Description : not classified & original description: none


Gene families : OG0000816 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000816_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48306
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cba_g12800 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g11549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20886 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.04 OrthoFinder output from all 47 species
Gb_39870 FAO3, ATFAO3 Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33520.1 FAO3, ATFAO3,... Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 OrthoFinder output from all 47 species
Lfl_g33696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000323 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017389 No alias not classified & original description: CDS=30-2393 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022161 No alias not classified & original description: CDS=181-2538 0.03 OrthoFinder output from all 47 species
Solyc09g072610.3.1 Solyc09g072610 Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.03 OrthoFinder output from all 47 species
Spa_g10220 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52472 FAO3, ATFAO3 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 257 521
IPR007867 GMC_OxRtase_C 619 748
No external refs found!