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  5. Msp_g48146

Msp_g48146


Description : not classified & original description: none


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00175460 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00082900 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g068963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G058800.1 Ceric.04G058800 not classified & original description: pacid=50631350... 0.03 OrthoFinder output from all 47 species
Dac_g01745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018805001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_26190 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os04g45930.3 LOC_Os04g45930 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g27110.1 LOC_Os07g27110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g18521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023957 No alias not classified & original description: CDS=113-2587 0.02 OrthoFinder output from all 47 species
Solyc10g062180.2.1 Solyc10g062180 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e007365_P001 Zm00001e007365 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e012880_P004 Zm00001e012880 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 344 407
IPR000504 RRM_dom 439 501
IPR000504 RRM_dom 264 332
No external refs found!