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  5. Msp_g47852

Msp_g47852


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47852

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00247110 SKIP4,... F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g04885 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g25878 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13328.t1 Aspi01Gene13328 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.16G058100.1 Ceric.16G058100 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.22G041400.1 SKIP6, Ceric.22G041400 not classified & original description: pacid=50613861... 0.01 OrthoFinder output from all 47 species
Len_g02329 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Mp1g25860.1 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g06659 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g11761 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008048 AFR substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g01338 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 212 258
No external refs found!