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  5. Msp_g47653

Msp_g47653


Description : not classified & original description: none


Gene families : OG0001062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47653
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT4G14270 No alias BEST Arabidopsis thaliana protein match is:... 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014553 ERD15, LSR1, CID1 not classified & original description: CDS=92-463 0.04 OrthoFinder output from all 47 species
Ehy_g07257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g25290.1 ERD15, LSR1, CID1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015156 No alias not classified & original description: CDS=1-333 0.04 OrthoFinder output from all 47 species
Zm00001e031500_P001 ERD15, LSR1,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009818 Ataxin-2_C 32 47
No external refs found!