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  5. Msp_g47632

Msp_g47632 (LACS9)


Aliases : LACS9

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0001695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001695_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47632
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Als_g03175 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06687 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0179.g056257 LACS8 long-chain acyl-CoA synthetase *(LACS9) & original... 0.05 OrthoFinder output from all 47 species
Cba_g26392 LACS8 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10284 LACS8 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g39701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo96881 LACS9 Long chain acyl-CoA synthetase 9, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 87 550
No external refs found!