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  5. Msp_g47492

Msp_g47492


Description : not classified & original description: none


Gene families : OG0002688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002688_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47492
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Sacu_v1.1_s0069.g016609 No alias not classified & original description: CDS=28-3702 0.03 OrthoFinder output from all 47 species
Smo76246 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e000324_P005 Zm00001e000324 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR021916 DUF3527 658 784
IPR021916 DUF3527 385 520
No external refs found!