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  5. Msp_g47227

Msp_g47227


Description : not classified & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g47227

Target Alias Description ECC score Gene Family Method Actions
AT3G17860 JAI3, JAZ3, TIFY6B jasmonate-zim-domain protein 3 0.03 OrthoFinder output from all 47 species
Aev_g12202 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G092200.1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.01G092300.1 JAZ9, TIFY7,... not classified & original description: pacid=50591690... 0.06 OrthoFinder output from all 47 species
LOC_Os04g55920.1 JAZ12, TIFY3B,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_68496g0010 TIFY10B, JAZ2 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_8355655g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Ore_g16393 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56550 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g06060 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g009220.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Solyc12g049400.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Zm00001e000588_P001 Zm00001e000588 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e004862_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e006083_P001 TIFY10B, JAZ2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012856_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Zm00001e035549_P001 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species

Type
  • GO Term
    		•  Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source

    No Predicted GO terms available for this sequence
    InterPro domains Description Start Stop
    IPR018467 CCT_CS 84 103
    No external refs found!