Smo96758 (PACid_15410129)


Aliases : PACid_15410129

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12) CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525) BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1) Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615 Bacteria - 304057 Metazoa - 8776 Fungi - 6428 Plants - 5794 Viruses - 2 Other Eukaryotes - 45311 (source: NCBI BLink). & (chl4|516135 : 813.0


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo96758
Cluster HCCA cluster: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.02 Gene family
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 Gene family
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.04 Gene family
AT3G16340 PDR1, ATPDR1 pleiotropic drug resistance 1 0.01 Gene family
Cre01.g007000 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Cre07.g313250 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01031377001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01033804001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01034746001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42350 Os01g0609000 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
MA_12965g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_38272g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_42871g0010 No alias No description available 0.02 Gene family
MA_949447g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo235359 PACid_15405313 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo429390 PACid_15416241 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc05g018510.3.1 Solyc05g018510.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g065655.1.1 Solyc06g065655.1 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc08g067620.3.1 Solyc08g067620.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc11g067000.2.1 Solyc11g067000.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g019620.2.1 Solyc12g019620.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d019951 GRMZM2G012465,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d025012 GRMZM2G319138 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d043598 GRMZM2G000614 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 840 992
No external refs found!