AMTR_s00019p00148170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.136

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein


Gene families : OG_01_0000907 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000907_tree ,
OG_02_0000738 (LandPlants) Phylogenetic Tree(s): OG_02_0000738_tree ,
OG_03_0003044 (SeedPlants) Phylogenetic Tree(s): OG_03_0003044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00148170
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT5G47480 No alias RGPR-related 0.14 Archaeplastida
Cpa|evm.model.tig00001215.21 No alias No description available 0.01 Archaeplastida
Cre01.g008850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.16 Archaeplastida
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.11 Archaeplastida
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 Archaeplastida
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.09 Archaeplastida
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 Archaeplastida
Pp3c12_25260V3.1 No alias RGPR-related 0.04 Archaeplastida
Pp3c19_909V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c4_2860V3.1 No alias RGPR-related 0.01 Archaeplastida
Smo442780 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 Archaeplastida
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Zm00001e013404_P001 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Zm00001e025399_P002 No alias Sar1-GTPase-regulating protein (Sec16) 0.11 Archaeplastida
Zm00001e029805_P005 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
AT5G47480 No alias RGPR-related 0.13 LandPlants
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.15 LandPlants
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.1 LandPlants
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 LandPlants
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 LandPlants
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 LandPlants
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 LandPlants
Pp3c12_25260V3.1 No alias RGPR-related 0.04 LandPlants
Pp3c19_909V3.1 No alias No annotation 0.03 LandPlants
Pp3c4_2860V3.1 No alias RGPR-related 0.01 LandPlants
Smo442780 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 LandPlants
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 LandPlants
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 LandPlants
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 LandPlants
Zm00001e013404_P001 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 LandPlants
Zm00001e025399_P002 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 LandPlants
Zm00001e029805_P005 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 LandPlants
AT5G47480 No alias RGPR-related 0.12 SeedPlants
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.14 SeedPlants
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.1 SeedPlants
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 SeedPlants
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 SeedPlants
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 SeedPlants
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 SeedPlants
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 SeedPlants
Zm00001e013404_P001 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 SeedPlants
Zm00001e025399_P002 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 SeedPlants
Zm00001e029805_P005 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024340 Sec16_CCD 768 892
No external refs found!