Msp_g45901


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g45901

Target Alias Description ECC score Gene Family Method Actions
Ala_g35869 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G019000.1 Ceric.02G019000 not classified & original description: pacid=50585115... 0.05 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45773 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59330 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15589 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23280 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 661 687
IPR002885 Pentatricopeptide_repeat 561 585
IPR002885 Pentatricopeptide_repeat 485 533
IPR002885 Pentatricopeptide_repeat 587 633
IPR002885 Pentatricopeptide_repeat 182 229
IPR002885 Pentatricopeptide_repeat 384 433
IPR002885 Pentatricopeptide_repeat 283 332
IPR046848 E_motif 704 753
No external refs found!