1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g44944

Msp_g44944


Description : not classified & original description: none


Gene families : OG0011222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011222_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44944

Target Alias Description ECC score Gene Family Method Actions
Aop_g12673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 678 724
IPR002885 Pentatricopeptide_repeat 476 521
IPR002885 Pentatricopeptide_repeat 381 422
IPR002885 Pentatricopeptide_repeat 780 810
IPR002885 Pentatricopeptide_repeat 178 208
IPR002885 Pentatricopeptide_repeat 953 977
IPR002885 Pentatricopeptide_repeat 652 675
IPR002885 Pentatricopeptide_repeat 881 910
IPR002885 Pentatricopeptide_repeat 276 306
IPR002885 Pentatricopeptide_repeat 450 472
IPR002885 Pentatricopeptide_repeat 853 878
IPR002885 Pentatricopeptide_repeat 752 777
IPR002885 Pentatricopeptide_repeat 248 275
IPR002885 Pentatricopeptide_repeat 79 107
IPR002885 Pentatricopeptide_repeat 551 574
No external refs found!