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  5. Msp_g44658

Msp_g44658 (PKDM7D)


Aliases : PKDM7D

Description : histone demethylase *(PKDM7) & original description: none


Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44658
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.04 OrthoFinder output from all 47 species
Aev_g06155 PKDM7D not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15008 No alias histone demethylase *(KDM5) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17236 No alias histone demethylase *(KDM5) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01359 No alias histone demethylase *(KDM5) & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g514250 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.01 OrthoFinder output from all 47 species
GSVIVT01023517001 PKDM7D RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 OrthoFinder output from all 47 species
Len_g14189 No alias histone demethylase *(KDM5) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18977 PKDM7D histone demethylase *(PKDM7) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04296 No alias histone demethylase *(KDM5) & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g17910.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Pir_g58500 PKDM7D histone demethylase *(PKDM7) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54999 PKDM7D histone demethylase *(PKDM7) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11634 No alias histone demethylase *(KDM5) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013363_P002 Zm00001e013363 histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 582 634
IPR003349 JmjN 141 174
IPR003347 JmjC_dom 362 478
No external refs found!