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  5. Msp_g44488

Msp_g44488


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44488

Target Alias Description ECC score Gene Family Method Actions
Ala_g33378 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06333 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07388 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g46291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 125
IPR002885 Pentatricopeptide_repeat 295 343
IPR002885 Pentatricopeptide_repeat 179 225
IPR002885 Pentatricopeptide_repeat 399 429
IPR002885 Pentatricopeptide_repeat 471 499
IPR002885 Pentatricopeptide_repeat 370 390
No external refs found!