Msp_g44335


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44335
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00109240 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00213230 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005730 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g042866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10387 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009069 CRR22 not classified & original description: CDS=1-1992 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023828 No alias not classified & original description: CDS=1-1797 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048869 No alias not classified & original description: CDS=1-2157 0.04 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.04 OrthoFinder output from all 47 species
Azfi_s0141.g051350 No alias not classified & original description: CDS=124-2304 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26848 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.13G049100.1 Ceric.13G049100 not classified & original description: pacid=50635384... 0.03 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.04 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G020200.1 Ceric.31G020200 not classified & original description: pacid=50574865... 0.03 OrthoFinder output from all 47 species
Dac_g07318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05694 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06831 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003650001 OTP80 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Len_g04697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09274 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44856 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23166 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34226 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05345 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001330 No alias not classified & original description: CDS=1-3081 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006762 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011812 OTP84 not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017880 No alias not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020627 No alias not classified & original description: CDS=1-2037 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023175 No alias not classified & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024290 No alias not classified & original description: CDS=1-2301 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025550 No alias not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025848 No alias not classified & original description: CDS=1-2184 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.04 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo93321 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Spa_g06564 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 257 281
IPR002885 Pentatricopeptide_repeat 285 315
IPR002885 Pentatricopeptide_repeat 180 228
No external refs found!